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graphene:structure_optimization [2015/05/28 15:51]
graphene:structure_optimization [2015/05/28 15:51]
krejcio
Line 1: Line 1:
 +
 +script file
 +  alat=" 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0"
 +  for i in $alat;
 +  do
 +   echo $i
 +   mkdir $i
 +   ​lattice="​`echo $i`";
 +   sed "​s/​AAA/​$lattice/​g" ​ fireball.sample > fireball.in;​
 +   ​./​runTG.com > a-$i.out
 +   grep "​etot/​atom"​ a-$i.out | cut -b50-65
 +   mv CHARGES $i/
 +   mv a-$i.out $i/
 +  done
 +
 +fireball.sample
 +
 +  &OPTION
 +  basisfile = C1.bas
 +  lvsfile = C1.lvs
 +  kptpreference = C1.32.kpts
 +  nstepf = 1
 +  ifixcharge = 0
 +  iqout = 1
 +  rescal = AAA
 +  &END
 +  &OUTPUT
 +  iwrteigen = 1
 +  &END
 +
 +atomic coordinates are defined in **C.bas** file C¹(0.0, 0.0) and C²(√3/3, 0.0):
 +        2
 +  6  0.0000000 ​ 0.00000000 ​ 0.00000000
 +  6  0.57735027 0.00000000 0.00000000
 +
 +lattice vector a1(√3/2, 0.5); a2(√3/2, -0.5):
 +
 +  0.8660254 ​  ​0.5000000 ​  ​0.00000000
 +  0.8660254 ​ -0.5000000 ​  ​0.00000000
 +  0.00000000 ​ 0.00000000 ​ 60.00000000
 +
 +The full Brillouine Zone (BZ) was sampled by 8x8 (Monkhorst-Pack grid). But for the energy optimization just Irreducible BZ (IBZ( is needed. In this case applying inversion symmetry we will get 32 k-points from 64 k-points for sampling the IBZ.
 +The SCF solution has been obtained using 32 k-points, in file C1.32.kpts:
 +
 +            32
 +   ​-3.17414904 ​   0.00000000 ​   0.00000000 ​          ​0.03125000
 +   ​-2.72069907 ​  ​-0.78539819 ​   0.00000000 ​          ​0.03125000
 +   ​-2.26724935 ​  ​-1.57079637 ​   0.00000000 ​          ​0.03125000
 +   ​-1.81379938 ​  ​-2.35619450 ​   0.00000000 ​          ​0.03125000
 +   ​-1.36034954 ​  ​-3.14159274 ​   0.00000000 ​          ​0.03125000
 +    2.72069911 ​   2.35619441 ​   0.00000000 ​          ​0.03125000
 +    3.17414895 ​   1.57079641 ​   0.00000000 ​          ​0.03125000
 +    3.62759880 ​   0.78539840 ​   0.00000000 ​          ​0.03125000
 +   ​-2.72069907 ​   0.78539819 ​   0.00000000 ​          ​0.03125000
 +   ​-2.26724935 ​   0.00000000 ​   0.00000000 ​          ​0.03125000
 +   ​-1.81379938 ​  ​-0.78539819 ​   0.00000000 ​          ​0.03125000
 +   ​-1.36034954 ​  ​-1.57079637 ​   0.00000000 ​          ​0.03125000
 +   ​-0.90689969 ​  ​-2.35619450 ​   0.00000000 ​          ​0.03125000
 +   ​-0.45344985 ​  ​-3.14159274 ​   0.00000000 ​          ​0.03125000
 +    0.00000000 ​  ​-3.92699099 ​   0.00000000 ​          ​0.03125000
 +   ​-3.17414895 ​   1.57079641 ​   0.00000000 ​          ​0.03125000
 +   ​-2.26724935 ​   1.57079637 ​   0.00000000 ​          ​0.03125000
 +   ​-1.81379938 ​   0.78539819 ​   0.00000000 ​          ​0.03125000
 +   ​-1.36034954 ​   0.00000000 ​   0.00000000 ​          ​0.03125000
 +   ​-0.90689969 ​  ​-0.78539819 ​   0.00000000 ​          ​0.03125000
 +   ​-0.45344985 ​  ​-1.57079637 ​   0.00000000 ​          ​0.03125000
 +    0.00000000 ​  ​-2.35619450 ​   0.00000000 ​          ​0.03125000
 +    0.45344985 ​  ​-3.14159274 ​   0.00000000 ​          ​0.03125000
 +   ​-2.72069911 ​   2.35619441 ​   0.00000000 ​          ​0.03125000
 +   ​-1.81379938 ​   2.35619450 ​   0.00000000 ​          ​0.03125000
 +   ​-1.36034954 ​   1.57079637 ​   0.00000000 ​          ​0.03125000
 +   ​-0.90689969 ​   0.78539819 ​   0.00000000 ​          ​0.03125000
 +   ​-0.45344985 ​   0.00000000 ​   0.00000000 ​          ​0.03125000
 +    0.00000000 ​  ​-0.78539819 ​   0.00000000 ​          ​0.03125000
 +    0.45344985 ​  ​-1.57079637 ​   0.00000000 ​          ​0.03125000
 +    0.90689969 ​  ​-2.35619450 ​   0.00000000 ​          ​0.03125000
 +    1.36034954 ​  ​-3.14159274 ​   0.00000000 ​          ​0.03125000
 +The total energy vs. the lattice parameter is plotted here:
 +
 +
 +
  
graphene/structure_optimization.txt · Last modified: 2015/05/28 15:51 (external edit)